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OMIC Data Formats: Notes for the Modeling Research Group
20 Feb 2009 | Notes | Contributor(s): Ann Christine Catlin
Each OMIC analysis laboratory has one or more analysis workflows that begin with instrument-generated datasets, where the format of the instrument dataset made available to modeling researchers for …
http://ccehub.org/resources/222
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Global Proteomics Sample Preparation Protocol
13 Feb 2009 | Notes | Contributor(s): Catherine Riley
The urea-based trypsin digestion sample preparation protocol is used for the plasma samples acquired through the Cancer Care Engineering Colorectal Cancer OMIC Study. Prepared samples are analyzed …
http://ccehub.org/resources/207
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LECO GC-TOF Instrument Setup: Metabolomics for Cancer Care Engineering
13 Feb 2009 | Notes | Contributor(s): Daniel Raftery
This document describes the setup for the LECO GC-TOF mass spectrometry instrument in preparation for metabolomics GCxGC-MS analysis of serum samples processed from patient whole blood at the IUSCC …
http://ccehub.org/resources/205
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Sample Preparation : Metabolomics Analysis for Cancer Care Engineering
13 Feb 2009 | Notes | Contributor(s): Daniel Raftery, Ann Christine Catlin
This document describes the preparation of serum samples in the Raftery Laboratory for metabolomics GCxCG-MS analysis using the LECO GC-TOF mass spectrometer.Serum samples are processed from patient …
http://ccehub.org/resources/203
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Sample Preparation Protocol: Lipidomics for Cancer Care Engineering
14 Oct 2008 | Notes | Contributor(s): Zhenwen Zhao
This document describes the preparation of the plasma sample for lipidomics analysis using the API-4000 mass spectrometer. The plasma was processed from the patient whole blood at the IUSCC clinic …
http://ccehub.org/resources/118
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API-4000 Instrument Setup : Lipidomics for Cancer Care Engineering
14 Oct 2008 | Notes | Contributor(s): Zhenwen Zhao
This document describes the setup for the API-4000 mass spectrometry instrument in preparation for lipidomics analysis of the plasma processed from the patient whole blood.
http://ccehub.org/resources/117