Syndromic Surveillance Hypothesis Development Using Visual Analytics
09 Sep 2008 | Downloads | Contributor(s): Ross Maciejewski, David Ebert
When analyzing syndromic surveillance data, health care officials look for areas with unusually high cases of syndromes. Unfortunately, many outbreaks are difficult to detect because their signal is obscured by the statistical noise. Consequently, many detection algorithms have a high false …
NCI Diet History Questionnaire
30 Sep 2008 | Downloads | Contributor(s): Julie Nagel
The Diet History Questionnaire (DHQ) is a food frequency questionnaire (FFQ) developed by staff at the Risk Factor Monitoring and Methods Branch (RFMMB) at NCI. This FFQ consists of 124 food items and includes both portion size and dietary supplement questions. It takes about 1 hour to complete and …
Lifestyle Exposure Questionnaire
02 Oct 2008 | Downloads | Contributor(s): Kyle Nicholas Kurasz, Rajendran Sellamuthu, Ann Christine Catlin
This questionnaire will be adminstered to all consented patients to collect information on their lifestyle and environmental exposures.James Klaunig, PhD, Associate Director, IU Simon Cancer Center, Director, Center for Environmental Health
Metabolomics-Based Methods for Biomarker Discovery of Disease
06 Oct 2008 | Downloads | Contributor(s): Daniel Raftery
The presentation gives an overview of metabolomics and Cancer Care Engineering.
The combination of NMR and multivariate statistical analysis is providing a new way to analyze complex samples such as biofluids. The field of metabolite profiling or "metabolomics" has significant implications for …
Peptide mass spec details calculator
22 Nov 2008 | Downloads | Contributor(s): Laurie Parker
This spreadsheet can be used to predict peptide molecular weights, predicted m/z values, predicted MS/MS fragment ions and deletions and terminations obtained during solid phase peptide synthesis.
All of the standard amino acids can be used with the spreadsheet using their one-letter codes, and …
A Database of Human Annotated and Predicted Protein Interactions (HAPPI)
13 Oct 2008 | Downloads
The HAPPI database is a free, open-access, and comprehensive database collection of computer annotated human protein-protein interactions from public data sources and computational predictions. The database was developed by exhaustively integrating publicly available human protein interaction data …
BioMap: Biomedical Associations and Pathways
03 Dec 2008 | Downloads
BioMap is an attempt to create a scalable knowledgebase of biological relationships extracted from the vast amount of biomedical literature data. Biomap discovers associations among biological entities from literature and validates these associations.
Large number of associations among various …
Western Blotting Protocol
10 Dec 2008 | Downloads | Contributor(s): Laurie Parker, Tzu-Yi Yang, ,
The following documents are available here for download:
Protein Gel Electrophoresis using Invitrogen box (including Sample Preparation)
Western Blotting: Membrane Transfer
Western Blotting: MemCode Protein Stain
Western Blotting: Blocking/Antibody
Western Blotting: Reagent Preparations
An Adaptive-Predictive Model for Colonic Neoplasia Incidence
15 Mar 2009 | Downloads | Contributor(s): Eric Sherer
Discovery Brown Bag Seminar Series sponsored by Regenstrief Center for Healthcare Engineering.
RCHE presents Dr. Eric Sherer, Medical Informatics Fellow Candidate, VA CIEBP.
Dr. Sherer has contributed several population-based models to cceHUB, and interested users can explore the colorectal …
PCTX and N2A Image slide show
18 Mar 2009 | Downloads | Contributor(s): , Laurie Parker