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The MACH 1.0 Markov Chain based Haplotyper
The MaCH Tool is used to infer missing genotypes in a two step process, where Step 1 estimates the model parameters, and Step 2 uses the parameters estimated in Step 1 -- calibrated to your specific dataset and genotyping platform -- to impute all SNPs.
Version 14.2 - published on 15 Sep 2010
This tool is closed source.