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Abstract

Visual Analytics for OMIC Data

A critical issue for the CCE project is how to rapidly evaluate and validate model predictions. An interactive, integrated, visual and statistical analysis capability was developed that will serve as a model for future CCE projects. An interactive visual analytic approach harnesses the power of traditional analysis and data mining techniques, as well as the power of the human visual system for instantly detecting patterns, trends and clusters, and the increased performance of human reasoning through the use of external cognitive artifacts.

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Current efforts in the Ann Christine Catlin
  • super-administrator
sponsoredby The Cancer Care Engineering project is supported by the Department of Defense, Congressionally Directed Medical Research Program, Fort Detrick, MD (W81-XWH-08-1-0065) administered jointly through the Oncological Sciences Center at Purdue University and the Indiana University Simon Cancer Center, the Walther Cancer Foundation, and the Regenstrief Foundation.
Cite this work

Researchers should cite this work as follows:

  • David Ebert; Ross Maciejewski (2008), "Visual Analytics for GCxGC-MS Data," http://ccehub.org/resources/105.

    BibTex | EndNote

Tags
  1. biomarker discovery
  2. colorectal cancer
  3. OMIC analysis
  4. visual analytics

In This Series

  1. Syndromic Surveillance Hypothesis Development Using Visual Analytics

    09 Sep 2008 | Downloads | Contributor(s): Ross Maciejewski, David S. Ebert

    When analyzing syndromic surveillance data, health care officials look for areas with unusually high cases of syndromes. Unfortunately, many outbreaks are difficult to detect because their signal is obscured by the statistical noise. Consequently, many detection algorithms have a high false …

  2. Visual Analytics for Cancer Care Engineering

    29 Aug 2008 | Teaching Materials | Contributor(s): David S. Ebert

    The Purdue University Regional Visualization and Analytics Center (PURVAC) presents a visual analytics tool for analyzing GCxGC TOF Mass Spectrometry data for metabolomics samples.

  3. CCE Retreat 2008 Part III

    28 Aug 2008 | Online Presentations | Contributor(s): Ann Christine Catlin, David S. Ebert

    Cancer Care Engineering Retreat Video Part III. (one hour) The following presentations are included in the video: Stan Hamilton, MD. Professor of Pathology. MD Anderson Cancer Care Center. (continued) Advances in Colorectal Cancer Biomarker Discovery. (00:00-7:35) David Ebert, …